ramongallego

I am a marine biologist turned bioinformatician. I work with #metabarcoding data from #eDNA in marine systems. Currently a #NRC postdoc working for NOAA

ramongallego@gmail.com
Seattle, WA
Twitter

My Projects

GitHub repositories that I've built.

demultiplexer_for_DADA2

If you want to use DADA2 with libraries created with banzai (github.com/jimmyodonnell/banzai) you need to demultiplex samples before
HTML 2 0

runQC

Set of R scripts to analyze the banzai output. It will show the missing samples, unexpected barcodes and other graphs
R 1 0

papers

All my papers so I can get figures and stuff from them
1 0

Nextera_Dada2

A wrapper around the process needed to process MiSeq reads with Dada2 when the libraries have been made with Nextera adapters
HTML 1 0

eDNA_functions

A series of R functions that come in handy while working with metabarcoding data
R 1 0

Temperatures

An example of package
R 0 0

My Interests

Topics that I want to learn more about.

#

eDNA

Shiny

Shiny
CSS Rmarkdown

CSS Rmarkdown
All things R

All things R